Stable Isotope Research Applications

Stable Isotope Assays for Collagen Turnover and Fibrosis

We measure newly synthesized tissue collagen using a stable isotope and mass spectrometry technique using heavy water (deuterium oxide) labeling in vivo. Our assay delivers sensitive, reproducible, regulator-trusted endpoints that accelerate antifibrotic research and therapeutic development.

Trusted by Pharma and Biotech to Validate Mechanism of Action

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Endpoints & Readouts

What Sets Us Apart in Metabolic Biomarker Analysis

Our clients get more than data. They get clarity, confidence, and a partner built for the unique demands of drug development.

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35+ Years exclusively in stable isotope tracer studies

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Experimental protocol designs and results delivered weeks faster than CROs
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GLP-compliant, CLIA-certified, 21 CFR Part 11 validated

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Consultative approach, with over 1,000+ studies guided from design to submission

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Excess collagen accumulation—driven by chronic inflammation, toxicants, or oxidative stress—causes fibrosis that can lead to organ failure.

Traditional approaches measure only static collagen pool size, which changes too slowly to capture drug effects or disease progression. Measuring fractional synthesis rates with stable isotope tracers offers a dynamic and earlier readout, providing a superior endpoint for antifibrotic evaluation.

Validated Endpoints for Fibrosis
and Collagen Turnover Services

We provide validated assays to quantify both static and dynamic measures of collagen

  • Fractional synthesis rates of collagen
  • Collagen concentration
  • Deuterium oxide labeling methods
  • Incorporation of Deuterium or 13C-labeled amino acids into collagen

Real-World Applications in Fibrosis
and Musculoskeletal Research

Our validated tracer assays for collagen turnover have been applied in both animal and human studies: 

Fractional Synthesis Rates of Collagen
(Deuterium oxide Tracer)

Quantifies new collagen synthesis in vivo using heavy water labeling.

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In animal studies, deuterium oxide (5%) is administered in drinking water for one week to label hydroxyproline in collagen.

At the time of tissue collection, a small plasma sample (~25 µL) is taken to measure precursor enrichment in body water. Harvested tissues are hydrolyzed to determine deuterium enrichment and hydroxyproline concentration. From these measurements, fractional synthesis rates of new collagen are calculated. 

This approach enables evaluation of fibrosis progression and therapeutic effects, including antifibrotic drugs or toxicant exposures such as carbon tetrachloride.

Collagen Fractional Synthesis Measurements
(Deuterium or 13C Labeled Amino Acid Tracers)

Measures collagen turnover in tissue biopsies using deuterium- or 13C-labeled amino acids with ultra-sensitive mass spectrometry.

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Flooding dose infusions of 13C- or deuterium-labeled amino acids can be applied to biopsy materials to quantify collagen synthesis rates. For example, Babraj et al. administered 13C-proline to human subjects and measured collagen fractional synthesis in muscle using gas chromatography–combustion isotope ratio mass spectrometry (GC-C-IRMS). 

This technique separates derivatized amino acids by gas chromatography, combusts them to CO₂ gas at 1000 °C, and measures isotopic enrichment with high precision.  

With this method, enrichment levels as low as 0.001% 13C can be detected, enabling an accurate assessment of collagen synthesis in human and animal studies. 

Validated Tracer Protocols for Collagen Synthesis

Our validated tracer assays for collagen turnover have been applied in both animal and human studies: 

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Liver Fibrosis

Measurement of liver collagen synthesis by heavy water labeling

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Musculoskeletal Health

Collagen synthesis in human musculoskeletal tissues

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All Analyses Are Performed In Our Certified Laboratory Environment

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Trusted by Leaders in Metabolic Research

From discovery to submission, we’ve earned the confidence of industry innovators through precision, speed, and scientific depth.

They’ve been very consistent… the sample analysis and data has always been timely and high quality.

There are academic labs that do it as well, but they’re much harder to engage and contract with.

I think they’re extremely organized and very on top of sample management. All the interactions that I’ve had with them have been great.

Looking for Answers?

Frequently Asked Questions

Which stable isotope tracers are used for collagen turnover studies?

Metabolic Solutions applies both deuterium oxide (D₂O) and 13C- or deuterium-labeled amino acids to measure collagen turnover.

How sensitive are Metabolic Solutions’s collagen synthesis assays?

Our assays are performed with gas chromatography–combustion isotope ratio mass spectrometry (GC-C-IRMS). This technique separates derivatized amino acids, combusts them to CO₂, and measures isotopic enrichment with high precision. Using this approach, we can detect enrichment levels as low as 0.001% 13C.

In which tissue types do you have experience with this assay?

Tissues commonly used for collagen turnover are Liver, Lung, and Muscle tissues.

Contact Us

Quantify Nitrogen Metabolism with Confidence

Our validated stable isotope assays for nitrogen metabolism studies provide mechanistic insights regulators trust. Let’s design the right study together. 

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Metabolic Solutions, LLC.
460 Amherst St., Nashua,
NH 03063, USA

Hours of Operation
Monday – Friday
7:30 am – 6:00 pm EST